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Purification of Nucleic Acid by Ethanol Precipitation with Sodium Acetate

Nucleic acids are water-soluble polyanionic compounds that can combine with many 1- and 2- valent ions to form salts. The latter are neither soluble nor denatured in organic solvents and form precipitates at lower temperatures.

1-1-2-purification-of-nucleic-acid-by-ethanol-precipitation-with-sodium-acetate-1

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Experimental Reagents

1. 3 mol/L sodium acetate buffer, pH 5.2: Weigh 408.1 g of sodium acetate (NaAC·3H2O), dissolve in 800 mL of water, adjust to pH 5.2 with glacial acetic acid, add distilled water to 1000 mL. High pressure sterilization after sub-packing (hereinafter referred to as 3 mol/L sodium acetate buffer).

2.Anhydrous ethanol and 70% (V/V) ethanol.

Experimental Operation

1. Use a pipette to transfer the nucleic acid-containing solution to a new Eppendorf centrifuge tube and measure the volume of the solution.

2. Add 1/10 volume of 3 mol/L sodium acetate buffer. Make the final concentration of sodium acetate 0.3 mol/L.

3. After mixing by inverting, add exactly 2 times the volume (2.5 times the volume for RNA) of pre-cooled absolute ethanol, mix by inverting, and place in an ice bath for 15 to 30 minutes or -20 °C for 30 minutes.

4. Centrifuge at 12000 r/min at 4 °C for 15 min.

5. Hold the Eppendorf at a 45-degree angle so that the nucleic acid precipitate faces upward. Do not touch the precipitate with a micropipette or a tip connected to a vacuum pump.

6. Add pre-cooled 70% ethanol to 2/3 of the volume. Mix and rinse to remove residual salt.

7. Centrifuge at 12000 r/min for 2 minutes at 4 °C, and aspirate the supernatant as in step 5.

8. Leave the tube uncovered and leave it at room temperature for 10-15 minutes or in a vacuum for 2 minutes to allow the ethanol to evaporate.

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